Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim11Q99PQ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.11■□□□□ 0.01
Trim11Q99PQ2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim11Q99PQ2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm38223-201ENSMUST00000194484 695 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm6218-201ENSMUST00000219812 628 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim11Q99PQ2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trim11Q99PQ2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms