Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msh4Q99MT2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Msh4Q99MT2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.92□□□□□ -0.34
Msh4Q99MT2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gm12485-201ENSMUST00000119641 291 ntBASIC12.92□□□□□ -0.34
Msh4Q99MT2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.92□□□□□ -0.34
Msh4Q99MT2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.92□□□□□ -0.34
Msh4Q99MT2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msh4Q99MT2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm11478-201ENSMUST00000117851 599 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm28911-201ENSMUST00000188837 117 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm44719-201ENSMUST00000206404 149 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.91□□□□□ -0.34
Msh4Q99MT2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msh4Q99MT2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Msh4Q99MT2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms