Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.87□□□□□ -0.35
Rnf111Q99ML9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Gm15321-201ENSMUST00000121290 288 ntBASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.86□□□□□ -0.35
Rnf111Q99ML9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.86□□□□□ -0.35
Rnf111Q99ML9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf111Q99ML9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm21854-201ENSMUST00000179901 471 ntBASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm9797-201ENSMUST00000052902 613 ntBASIC12.85□□□□□ -0.35
Rnf111Q99ML9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf111Q99ML9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.84□□□□□ -0.35
Rnf111Q99ML9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf111Q99ML9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms