Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Nkx6-1Q99MA9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm14028-201ENSMUST00000117434 479 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm12566-201ENSMUST00000121479 359 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx6-1Q99MA9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm22334-201ENSMUST00000158070 133 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm24514-201ENSMUST00000174961 285 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm44967-201ENSMUST00000207047 631 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx6-1Q99MA9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx6-1Q99MA9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms