Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Gm45880-201ENSMUST00000213041 853 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clcc1Q99LI2 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Clcc1Q99LI2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.08□□□□□ -0.31
Clcc1Q99LI2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.08□□□□□ -0.31
Clcc1Q99LI2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clcc1Q99LI2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Clcc1Q99LI2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Gm14350-201ENSMUST00000116642 640 ntBASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Gm4271-201ENSMUST00000174444 973 ntBASIC13.08□□□□□ -0.32
Clcc1Q99LI2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clcc1Q99LI2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm27514-201ENSMUST00000183692 110 ntBASIC13.07□□□□□ -0.32
Clcc1Q99LI2 Gm27682-201ENSMUST00000183930 110 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms