Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Daam2-202ENSMUST00000224595 1926 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm12134-201ENSMUST00000122109 520 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm8099-201ENSMUST00000200510 742 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm22058-201ENSMUST00000083393 310 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.26■□□□□ 0.19
RtcbQ99LF4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.25■□□□□ 0.19
RtcbQ99LF4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm13492-201ENSMUST00000119772 665 ntBASIC16.25■□□□□ 0.19
RtcbQ99LF4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.25■□□□□ 0.19
RtcbQ99LF4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.25■□□□□ 0.19
RtcbQ99LF4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RtcbQ99LF4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm8712-201ENSMUST00000221090 701 ntBASIC16.24■□□□□ 0.19
RtcbQ99LF4 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.24■□□□□ 0.19
RtcbQ99LF4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RtcbQ99LF4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RtcbQ99LF4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms