Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Lysmd3Q99LE3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lysmd3Q99LE3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lysmd3Q99LE3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms