Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.1□□□□□ -0.47
Lims1Q99JW4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lims1Q99JW4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Gm27306-201ENSMUST00000183970 107 ntBASIC12.09□□□□□ -0.47
Lims1Q99JW4 Mir6977-201ENSMUST00000184960 64 ntBASIC12.09□□□□□ -0.47
Lims1Q99JW4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.09□□□□□ -0.47
Lims1Q99JW4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.09□□□□□ -0.47
Lims1Q99JW4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lims1Q99JW4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lims1Q99JW4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lims1Q99JW4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lims1Q99JW4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lims1Q99JW4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lims1Q99JW4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.08□□□□□ -0.48
Lims1Q99JW4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lims1Q99JW4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lims1Q99JW4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms