Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm11779-201ENSMUST00000118541 368 ntBASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm28630-201ENSMUST00000187806 498 ntBASIC11.81□□□□□ -0.52
Thumpd1Q99J36 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Shd-206ENSMUST00000225145 998 ntBASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Thumpd1Q99J36 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm10253-201ENSMUST00000194270 940 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm18905-201ENSMUST00000205454 928 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm18206-201ENSMUST00000207027 926 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gm46209-201ENSMUST00000217912 553 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Thumpd1Q99J36 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Thumpd1Q99J36 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms