Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC20.58■□□□□ 0.88
Clip1Q922J3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip1Q922J3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC20.58■□□□□ 0.88
Clip1Q922J3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Clip1Q922J3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clip1Q922J3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC20.58■□□□□ 0.88
Clip1Q922J3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.58■□□□□ 0.88
Clip1Q922J3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC20.58■□□□□ 0.88
Clip1Q922J3 Gm18916-201ENSMUST00000198264 1246 ntBASIC20.58■□□□□ 0.88
Clip1Q922J3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clip1Q922J3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC20.58■□□□□ 0.88
Clip1Q922J3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clip1Q922J3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm6015-201ENSMUST00000217493 1586 ntBASIC20.57■□□□□ 0.88
Clip1Q922J3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm4819-201ENSMUST00000182170 1009 ntBASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.57■□□□□ 0.88
Clip1Q922J3 Gm5950-201ENSMUST00000213337 772 ntBASIC20.57■□□□□ 0.88
Clip1Q922J3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clip1Q922J3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Gm19221-201ENSMUST00000221827 1477 ntBASIC20.56■□□□□ 0.88
Clip1Q922J3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Gm2420-202ENSMUST00000202224 2249 ntBASIC20.56■□□□□ 0.88
Clip1Q922J3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Clip1Q922J3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clip1Q922J3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm43134-201ENSMUST00000199434 1886 ntBASIC20.55■□□□□ 0.88
Clip1Q922J3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm13875-201ENSMUST00000120162 282 ntBASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm12715-201ENSMUST00000121430 1128 ntBASIC20.55■□□□□ 0.88
Clip1Q922J3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm2546-201ENSMUST00000182630 991 ntBASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.55■□□□□ 0.88
Clip1Q922J3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC20.55■□□□□ 0.88
Clip1Q922J3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clip1Q922J3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.54■□□□□ 0.88
Clip1Q922J3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clip1Q922J3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms