Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdha3Q91Y16 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm13689-201ENSMUST00000119360 685 ntBASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm2495-201ENSMUST00000191160 466 ntBASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm5186-201ENSMUST00000218781 920 ntBASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdha3Q91Y16 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm12928-201ENSMUST00000117115 573 ntBASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Mir1894-201ENSMUST00000122802 81 ntBASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdha3Q91Y16 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdha3Q91Y16 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms