Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Gm8652-201ENSMUST00000181363 964 ntBASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Gm24196-201ENSMUST00000179161 110 ntBASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdha9Q91Y11 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Gm11618-201ENSMUST00000117946 267 ntBASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Gm11803-201ENSMUST00000119966 444 ntBASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdha9Q91Y11 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.05□□□□□ -0.16
Pcdha9Q91Y11 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms