Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb1Q91Y08 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb1Q91Y08 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb1Q91Y08 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Gm18018-201ENSMUST00000198273 408 ntBASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Pcdhb1Q91Y08 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb1Q91Y08 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms