Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.86□□□□□ -0.19
Pcdhb18Q91Y02 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm14350-201ENSMUST00000116642 640 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm25927-201ENSMUST00000175058 117 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Mir8109-201ENSMUST00000184375 117 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm43118-201ENSMUST00000199149 775 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm45930-201ENSMUST00000221330 292 ntBASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb18Q91Y02 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Gm44364-201ENSMUST00000198368 141 ntBASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Gm18935-201ENSMUST00000212692 664 ntBASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb18Q91Y02 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms