Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb3Q91XZ7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm25026-201ENSMUST00000175017 188 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb3Q91XZ7 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm6415-201ENSMUST00000118488 348 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm45166-201ENSMUST00000209073 683 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb3Q91XZ7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb3Q91XZ7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms