Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb4Q91XZ6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm20445-201ENSMUST00000061905 565 ntBASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb4Q91XZ6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm15920-201ENSMUST00000118998 402 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm21854-201ENSMUST00000179901 471 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Mir8102-201ENSMUST00000184148 139 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm27838-201ENSMUST00000184829 128 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm29667-201ENSMUST00000190817 490 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb4Q91XZ6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb4Q91XZ6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms