Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb8Q91XZ2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm45841-201ENSMUST00000207700 164 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhb8Q91XZ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb8Q91XZ2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb8Q91XZ2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms