Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.66□□□□□ -0.22
Rprd1aQ8VDS4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rprd1aQ8VDS4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm8598-201ENSMUST00000221184 836 ntBASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rprd1aQ8VDS4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rprd1aQ8VDS4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rprd1aQ8VDS4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rprd1aQ8VDS4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rprd1aQ8VDS4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms