Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc9Q8VC31 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Gm13036-201ENSMUST00000117799 748 ntBASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Mir5126-201ENSMUST00000175513 77 ntBASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 AC131586.1-201ENSMUST00000228844 2964 ntBASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc9Q8VC31 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Gm10548-201ENSMUST00000097631 2629 ntBASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc9Q8VC31 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Mir5131-201ENSMUST00000175426 93 ntBASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc9Q8VC31 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms