Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps39Q8R5L3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps39Q8R5L3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Mir7023-201ENSMUST00000185093 64 ntBASIC13.27□□□□□ -0.29
Vps39Q8R5L3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.27□□□□□ -0.29
Vps39Q8R5L3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps39Q8R5L3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps39Q8R5L3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms