Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm11918-201ENSMUST00000121660 179 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm2495-201ENSMUST00000191160 466 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm44397-201ENSMUST00000195950 113 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm18041-201ENSMUST00000218210 618 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rfwd3Q8CIK8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rfwd3Q8CIK8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfwd3Q8CIK8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Rfwd3Q8CIK8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms