Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Mir1894-201ENSMUST00000122802 81 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 Gm8463-201ENSMUST00000208573 613 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.55□□□□□ -0.24
CopaQ8CIE6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CopaQ8CIE6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.54□□□□□ -0.24
CopaQ8CIE6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm27772-201ENSMUST00000184900 187 ntBASIC13.54□□□□□ -0.24
CopaQ8CIE6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.54□□□□□ -0.24
CopaQ8CIE6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.54□□□□□ -0.24
CopaQ8CIE6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CopaQ8CIE6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm15429-201ENSMUST00000151268 798 ntBASIC13.53□□□□□ -0.24
CopaQ8CIE6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.53□□□□□ -0.24
CopaQ8CIE6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.53□□□□□ -0.24
CopaQ8CIE6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.53□□□□□ -0.24
CopaQ8CIE6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CopaQ8CIE6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CopaQ8CIE6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms