Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Mir698-201ENSMUST00000102164 109 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm12490-201ENSMUST00000120255 560 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm12091-201ENSMUST00000146791 830 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm5745-201ENSMUST00000183748 313 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm6745-201ENSMUST00000199216 526 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.37□□□□□ -0.27
Clip4Q8CI96 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clip4Q8CI96 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.36□□□□□ -0.27
Clip4Q8CI96 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.36□□□□□ -0.27
Clip4Q8CI96 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.36□□□□□ -0.27
Clip4Q8CI96 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clip4Q8CI96 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.36□□□□□ -0.27
Clip4Q8CI96 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Gm12341-201ENSMUST00000119724 503 ntBASIC13.35□□□□□ -0.27
Clip4Q8CI96 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.35□□□□□ -0.27
Clip4Q8CI96 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.35□□□□□ -0.27
Clip4Q8CI96 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Clip4Q8CI96 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms