Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Alx1Q8C8B0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm37042-201ENSMUST00000193816 581 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.42■□□□□ 0.06
Alx1Q8C8B0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Alx1Q8C8B0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm23931-201ENSMUST00000103842 109 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm14127-201ENSMUST00000117906 678 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm4768-201ENSMUST00000206199 686 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Alx1Q8C8B0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Snord83b-201ENSMUST00000104546 94 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Snora78-201ENSMUST00000158630 128 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 AY702102-202ENSMUST00000194651 1173 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms