Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc60Q8C4J0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Gm8810-201ENSMUST00000172895 754 ntBASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Gm44069-201ENSMUST00000204898 506 ntBASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccdc60Q8C4J0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Mir874-201ENSMUST00000104769 76 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Gm11814-201ENSMUST00000119515 929 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc60Q8C4J0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Gm16202-201ENSMUST00000117532 544 ntBASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Gm10156-201ENSMUST00000122364 462 ntBASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc60Q8C4J0 Gm24196-201ENSMUST00000179161 110 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms