Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Scfd1Q8BRF7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Gm13342-201ENSMUST00000121055 207 ntBASIC15.07■□□□□ 0
Scfd1Q8BRF7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Gm10608-202ENSMUST00000213924 676 ntBASIC15.07■□□□□ 0
Scfd1Q8BRF7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.07■□□□□ 0
Scfd1Q8BRF7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scfd1Q8BRF7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Snord83b-201ENSMUST00000104546 94 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm12241-201ENSMUST00000118330 726 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm24548-201ENSMUST00000158650 108 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm22121-201ENSMUST00000175148 54 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm19931-201ENSMUST00000198920 368 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm8227-201ENSMUST00000223306 571 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scfd1Q8BRF7 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.06■□□□□ 0
Scfd1Q8BRF7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scfd1Q8BRF7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scfd1Q8BRF7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Scfd1Q8BRF7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.05■□□□□ 0
Scfd1Q8BRF7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scfd1Q8BRF7 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.05■□□□□ -0
Scfd1Q8BRF7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scfd1Q8BRF7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.05■□□□□ -0
Scfd1Q8BRF7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Scfd1Q8BRF7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Scfd1Q8BRF7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.05■□□□□ -0
Scfd1Q8BRF7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.05■□□□□ -0
Scfd1Q8BRF7 Gm7783-201ENSMUST00000204795 781 ntBASIC15.05■□□□□ -0
Scfd1Q8BRF7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms