Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp2bQ8BJF9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp2bQ8BJF9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Chmp2bQ8BJF9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm13223-201ENSMUST00000118609 747 ntBASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp2bQ8BJF9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms