Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc40Q8BI79 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc40Q8BI79 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc40Q8BI79 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms