Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.49□□□□□ -0.41
Clrn3Q8BHH8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Gm26464-201ENSMUST00000157094 305 ntBASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Gm6218-201ENSMUST00000219812 628 ntBASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn3Q8BHH8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.47□□□□□ -0.41
Clrn3Q8BHH8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn3Q8BHH8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms