Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Gm12390-201ENSMUST00000117897 397 ntBASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atg4dQ8BGV9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Atg4dQ8BGV9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.43
Atg4dQ8BGV9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Atg4dQ8BGV9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.32□□□□□ -0.44
Atg4dQ8BGV9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms