Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gm6745-201ENSMUST00000199216 526 ntBASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.55■□□□□ 0.08
Samm50Q8BGH2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Gm15240-201ENSMUST00000118156 720 ntBASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Gm5745-201ENSMUST00000183748 313 ntBASIC15.54■□□□□ 0.08
Samm50Q8BGH2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Gm9794-201ENSMUST00000202370 423 ntBASIC15.54■□□□□ 0.08
Samm50Q8BGH2 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.54■□□□□ 0.08
Samm50Q8BGH2 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Samm50Q8BGH2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Gm45668-201ENSMUST00000211271 493 ntBASIC15.53■□□□□ 0.08
Samm50Q8BGH2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Samm50Q8BGH2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms