Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Mir874-201ENSMUST00000104769 76 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atg4bQ8BGE6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Atg4bQ8BGE6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atg4bQ8BGE6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms