Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scaf4Q6PFF0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gm19931-201ENSMUST00000198920 368 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gm43703-201ENSMUST00000200523 763 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scaf4Q6PFF0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Mir449b-201ENSMUST00000104833 80 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm3436-201ENSMUST00000179930 840 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 AW822252-206ENSMUST00000208904 237 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Scaf4Q6PFF0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms