Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Snrnp40Q6PE01 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Gm11531-201ENSMUST00000117614 555 ntBASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Snrnp40Q6PE01 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm13570-201ENSMUST00000140763 309 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm42997-202ENSMUST00000200321 985 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm5904-201ENSMUST00000210286 865 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm5950-201ENSMUST00000213337 772 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms