Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Gm38223-201ENSMUST00000194484 695 ntBASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcc2Q6PDG5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Gm15371-201ENSMUST00000117057 784 ntBASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcc2Q6PDG5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
Smarcc2Q6PDG5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm42550-201ENSMUST00000201553 960 ntBASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm5356-201ENSMUST00000093326 615 ntBASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcc2Q6PDG5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms