Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm12384-201ENSMUST00000119228 919 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm16177-201ENSMUST00000120728 718 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Proscos-202ENSMUST00000178990 666 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hmgb4Q6P8W9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hmgb4Q6P8W9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hmgb4Q6P8W9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Hmgb4Q6P8W9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Hmgb4Q6P8W9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Itm2b-204ENSMUST00000228637 783 ntBASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb4Q6P8W9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm29705-201ENSMUST00000212598 474 ntBASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb4Q6P8W9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 289 ms