Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.03□□□□□ -0.32
VclQ64727 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Gm17150-201ENSMUST00000165577 381 ntBASIC13.03□□□□□ -0.32
VclQ64727 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.03□□□□□ -0.32
VclQ64727 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.03□□□□□ -0.32
VclQ64727 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.03□□□□□ -0.32
VclQ64727 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.03□□□□□ -0.32
VclQ64727 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VclQ64727 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
VclQ64727 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VclQ64727 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VclQ64727 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
VclQ64727 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VclQ64727 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.02□□□□□ -0.33
VclQ64727 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.02□□□□□ -0.33
VclQ64727 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Gm27847-201ENSMUST00000183711 107 ntBASIC13.02□□□□□ -0.33
VclQ64727 Gm27375-201ENSMUST00000183799 107 ntBASIC13.02□□□□□ -0.33
VclQ64727 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.02□□□□□ -0.33
VclQ64727 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VclQ64727 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.02□□□□□ -0.33
VclQ64727 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.02□□□□□ -0.33
VclQ64727 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VclQ64727 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VclQ64727 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VclQ64727 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VclQ64727 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms