Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ctr9Q62018 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ctr9Q62018 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ctr9Q62018 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ctr9Q62018 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Ctr9Q62018 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Matn2-206ENSMUST00000228570 2798 ntBASIC15.62■□□□□ 0.09
Ctr9Q62018 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Gm12957-201ENSMUST00000117835 377 ntBASIC15.62■□□□□ 0.09
Ctr9Q62018 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.62■□□□□ 0.09
Ctr9Q62018 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.62■□□□□ 0.09
Ctr9Q62018 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.62■□□□□ 0.09
Ctr9Q62018 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.62■□□□□ 0.09
Ctr9Q62018 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ctr9Q62018 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Gm23931-201ENSMUST00000103842 109 ntBASIC15.61■□□□□ 0.09
Ctr9Q62018 Gm16202-201ENSMUST00000117532 544 ntBASIC15.61■□□□□ 0.09
Ctr9Q62018 Snora78-201ENSMUST00000158630 128 ntBASIC15.61■□□□□ 0.09
Ctr9Q62018 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ctr9Q62018 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ctr9Q62018 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.6■□□□□ 0.09
Ctr9Q62018 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Gm27682-201ENSMUST00000183930 110 ntBASIC15.6■□□□□ 0.09
Ctr9Q62018 Gm37424-201ENSMUST00000191727 561 ntBASIC15.6■□□□□ 0.09
Ctr9Q62018 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Ctr9Q62018 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ctr9Q62018 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms