Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Acot6-202ENSMUST00000222921 3622 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gm2231-201ENSMUST00000125661 612 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gm27682-201ENSMUST00000183930 110 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gm28693-202ENSMUST00000190758 331 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.79□□□□□ -0.2
Smarcd1Q61466 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.79□□□□□ -0.2
Smarcd1Q61466 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.78□□□□□ -0.2
Smarcd1Q61466 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm8805-201ENSMUST00000117848 313 ntBASIC13.78□□□□□ -0.2
Smarcd1Q61466 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm1335-201ENSMUST00000121653 386 ntBASIC13.78□□□□□ -0.2
Smarcd1Q61466 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Gm6458-201ENSMUST00000211573 635 ntBASIC13.78□□□□□ -0.2
Smarcd1Q61466 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd1Q61466 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Smarcd1Q61466 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd1Q61466 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd1Q61466 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd1Q61466 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.77□□□□□ -0.21
Smarcd1Q61466 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.77□□□□□ -0.21
Smarcd1Q61466 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Gm26927-201ENSMUST00000182385 965 ntBASIC13.77□□□□□ -0.21
Smarcd1Q61466 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.77□□□□□ -0.21
Smarcd1Q61466 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.77□□□□□ -0.21
Smarcd1Q61466 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd1Q61466 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.76□□□□□ -0.21
Smarcd1Q61466 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd1Q61466 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms