Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.03□□□□□ -0.16
FntaQ61239 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.03□□□□□ -0.16
FntaQ61239 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.03□□□□□ -0.16
FntaQ61239 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FntaQ61239 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FntaQ61239 Gm46209-201ENSMUST00000217912 553 ntBASIC14.03□□□□□ -0.16
FntaQ61239 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FntaQ61239 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
FntaQ61239 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.03□□□□□ -0.16
FntaQ61239 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.03□□□□□ -0.16
FntaQ61239 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FntaQ61239 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FntaQ61239 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
FntaQ61239 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
FntaQ61239 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.02□□□□□ -0.16
FntaQ61239 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.02□□□□□ -0.16
FntaQ61239 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.02□□□□□ -0.16
FntaQ61239 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FntaQ61239 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Gm6912-201ENSMUST00000117218 544 ntBASIC14.02□□□□□ -0.17
FntaQ61239 Gm15770-201ENSMUST00000117498 584 ntBASIC14.02□□□□□ -0.17
FntaQ61239 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.02□□□□□ -0.17
FntaQ61239 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
FntaQ61239 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
FntaQ61239 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.02□□□□□ -0.17
FntaQ61239 Gm27622-201ENSMUST00000183779 60 ntBASIC14.02□□□□□ -0.17
FntaQ61239 Gm7774-201ENSMUST00000200064 533 ntBASIC14.02□□□□□ -0.17
FntaQ61239 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FntaQ61239 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.02□□□□□ -0.17
FntaQ61239 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FntaQ61239 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.01□□□□□ -0.17
FntaQ61239 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.01□□□□□ -0.17
FntaQ61239 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Gm8410-201ENSMUST00000117225 605 ntBASIC14.01□□□□□ -0.17
FntaQ61239 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.01□□□□□ -0.17
FntaQ61239 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.01□□□□□ -0.17
FntaQ61239 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.01□□□□□ -0.17
FntaQ61239 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
FntaQ61239 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
FntaQ61239 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
FntaQ61239 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FntaQ61239 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FntaQ61239 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
FntaQ61239 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
FntaQ61239 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms