Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm11803-201ENSMUST00000119966 444 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Gm10156-201ENSMUST00000122364 462 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Proscos-202ENSMUST00000178990 666 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Gm16372-201ENSMUST00000073088 450 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfaip3Q60769 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Gm24644-201ENSMUST00000157114 139 ntBASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfaip3Q60769 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm8810-201ENSMUST00000172895 754 ntBASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Tnfaip3Q60769 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms