Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Gm45784-201ENSMUST00000188360 142 ntBASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps54Q5SPW0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Gm7029-201ENSMUST00000173226 450 ntBASIC15.88■□□□□ 0.13
Vps54Q5SPW0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps54Q5SPW0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm27682-201ENSMUST00000183930 110 ntBASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm43818-201ENSMUST00000200605 466 ntBASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps54Q5SPW0 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps54Q5SPW0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms