Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Mir874-201ENSMUST00000104769 76 ntBASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Gm10576-201ENSMUST00000191927 825 ntBASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav5d-4Q5R1F6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.4□□□□□ -0.59
Trav5d-4Q5R1F6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Auts2-212ENSMUST00000178555 309 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm38144-201ENSMUST00000192790 465 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.39□□□□□ -0.59
Trav5d-4Q5R1F6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms