Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm27486-201ENSMUST00000184923 80 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm37922-201ENSMUST00000195596 455 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm7561-201ENSMUST00000211203 886 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ckap2Q3V1H1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Mir686-201ENSMUST00000102174 109 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm11424-201ENSMUST00000121929 829 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm37497-201ENSMUST00000195830 798 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ckap2Q3V1H1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm12203-201ENSMUST00000118235 598 ntBASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm12209-201ENSMUST00000120089 596 ntBASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ckap2Q3V1H1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms