Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nlrc4Q3UP24 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
Nlrc4Q3UP24 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.96□□□□□ -0.17
Nlrc4Q3UP24 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nlrc4Q3UP24 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Nlrc4Q3UP24 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nlrc4Q3UP24 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm12203-201ENSMUST00000118235 598 ntBASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm12209-201ENSMUST00000120089 596 ntBASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm11978-201ENSMUST00000122315 466 ntBASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nlrc4Q3UP24 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm16202-201ENSMUST00000117532 544 ntBASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm11618-201ENSMUST00000117946 267 ntBASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm22331-201ENSMUST00000158066 136 ntBASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nlrc4Q3UP24 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nlrc4Q3UP24 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms