Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.49□□□□□ -0.41
Brf2Q3UAW9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Brf2Q3UAW9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gm15371-201ENSMUST00000117057 784 ntBASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Gm10576-201ENSMUST00000191927 825 ntBASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Brf2Q3UAW9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Auts2-212ENSMUST00000178555 309 ntBASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms