Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm8181-201ENSMUST00000062242 669 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm20628-201ENSMUST00000177363 3215 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm6322-201ENSMUST00000118789 1004 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Tmed9-203ENSMUST00000224741 1450 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm15566-201ENSMUST00000121130 590 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm8494-201ENSMUST00000178171 1233 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Mir8093-201ENSMUST00000185043 137 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm43273-201ENSMUST00000199649 2594 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm37269-201ENSMUST00000193906 1891 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm44981-201ENSMUST00000205549 1943 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm5190-201ENSMUST00000192434 357 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 AC135669.1-202ENSMUST00000216742 540 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 AC167013.1-201ENSMUST00000228592 202 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm12961-201ENSMUST00000120507 1050 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm3551-201ENSMUST00000190750 664 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Gm43184-201ENSMUST00000197247 542 ntBASIC6.8□□□□□ -1.32
Ush2AQ2QI47 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ush2AQ2QI47 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm15617-201ENSMUST00000118973 771 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm13281-201ENSMUST00000120871 567 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm6548-201ENSMUST00000167498 1165 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ush2AQ2QI47 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms