Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm13342-201ENSMUST00000121055 207 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm7584-201ENSMUST00000175829 940 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm27516-201ENSMUST00000184237 98 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm37497-201ENSMUST00000195830 798 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Ebf1Q07802 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.44□□□□□ -0.26
Ebf1Q07802 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf1Q07802 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ebf1Q07802 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.43□□□□□ -0.26
Ebf1Q07802 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Mir3102-201ENSMUST00000175555 104 ntBASIC13.43□□□□□ -0.26
Ebf1Q07802 Gm4857-201ENSMUST00000192718 785 ntBASIC13.43□□□□□ -0.26
Ebf1Q07802 Gm44364-201ENSMUST00000198368 141 ntBASIC13.43□□□□□ -0.26
Ebf1Q07802 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.43□□□□□ -0.26
Ebf1Q07802 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ebf1Q07802 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf1Q07802 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12403-201ENSMUST00000121384 959 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ebf1Q07802 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm37922-201ENSMUST00000195596 455 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm43133-201ENSMUST00000197472 463 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.42□□□□□ -0.26
Ebf1Q07802 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf1Q07802 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms