Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Col9a2Q07643 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col9a2Q07643 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col9a2Q07643 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.33□□□□□ -0.12
Col9a2Q07643 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.33□□□□□ -0.12
Col9a2Q07643 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Cts7-204ENSMUST00000225321 1257 ntBASIC14.33□□□□□ -0.12
Col9a2Q07643 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.33□□□□□ -0.12
Col9a2Q07643 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col9a2Q07643 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
Col9a2Q07643 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col9a2Q07643 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.32□□□□□ -0.12
Col9a2Q07643 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm37042-201ENSMUST00000193816 581 ntBASIC14.32□□□□□ -0.12
Col9a2Q07643 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm8227-201ENSMUST00000223306 571 ntBASIC14.32□□□□□ -0.12
Col9a2Q07643 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.32□□□□□ -0.12
Col9a2Q07643 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.32□□□□□ -0.12
Col9a2Q07643 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col9a2Q07643 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Gm26185-201ENSMUST00000157692 266 ntBASIC14.31□□□□□ -0.12
Col9a2Q07643 Gm17208-201ENSMUST00000168388 535 ntBASIC14.31□□□□□ -0.12
Col9a2Q07643 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.31□□□□□ -0.12
Col9a2Q07643 Gm10608-202ENSMUST00000213924 676 ntBASIC14.31□□□□□ -0.12
Col9a2Q07643 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col9a2Q07643 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.31□□□□□ -0.12
Col9a2Q07643 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col9a2Q07643 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col9a2Q07643 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col9a2Q07643 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col9a2Q07643 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col9a2Q07643 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms