Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Atf4Q06507 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm13059-201ENSMUST00000119881 398 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 Gm11622-201ENSMUST00000120525 691 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.83□□□□□ -0.36
Atf4Q06507 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm27731-201ENSMUST00000185192 107 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 Gm29127-201ENSMUST00000188304 517 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.83□□□□□ -0.36
Atf4Q06507 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atf4Q06507 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Atf4Q06507 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atf4Q06507 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Atf4Q06507 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm37863-201ENSMUST00000194911 1457 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.83□□□□□ -0.36
Atf4Q06507 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atf4Q06507 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf4Q06507 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.83□□□□□ -0.36
Atf4Q06507 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.82□□□□□ -0.36
Atf4Q06507 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Trbv27-201ENSMUST00000193711 277 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Gm43179-201ENSMUST00000198797 275 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.82□□□□□ -0.36
Atf4Q06507 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Atf4Q06507 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.82□□□□□ -0.36
Atf4Q06507 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 CT025525.2-201ENSMUST00000227743 423 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.82□□□□□ -0.36
Atf4Q06507 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atf4Q06507 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atf4Q06507 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf4Q06507 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.81□□□□□ -0.36
Atf4Q06507 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.81□□□□□ -0.36
Atf4Q06507 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atf4Q06507 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf4Q06507 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms